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What does "GNU" icon in the packages list [1] stand for?

They are part of the GNU system.

Btw, some projects are hosted on nongnu.org domain, those are not part of the GNU system.

And we'd love to see more! Information and instructions for submitting your project are in the link above.

(I'm part of the GNU evaluation team.)

Mouseover says "Part of GNU" - part of the GNU project, so managed by GNU.