Randomly selected favorites (restaurants, not websites) from my hometown:
http://shakeshack.com/ (Nope, I'm completely off-base here. Shake Shack has a lovely, flash-free, pdf-free mobile version. Apologies to Danny Meyer and company.)
http://barstuzzichini.com/index.asp
I should send them a snapshot of what their websites look like with ClickToFlash installed.