Windell and I talked about building a discrete 7400 (quad NAND gate), in theory you can build any logic you want out of enough NAND gates :-) but implementing the CPU on the PDP 8 was going to be a very , very big arrangement. at 13 in on a side this is pretty manageable. A lot of boards for the MicroVAX are larger than that.
Now the question is if you make a proportionally sized 40 pin package for it, how big is the Apple II motherboard? :-)
Nicely done, congrats on an awesome project. I must go to Makerfaire now to see this in person.