I'm a fan of Kresser, but I think he and the other "paleo" or former paleo guys went a little overboard with the soy witch hunt. I looked into it after Soylent changed from rice to soy protein. Really not too much supporting evidence for all this fear of estrogen and man boobs.
Edit: I agree that processed soy shouldn't be a "main" diet ingredient. But these guys freak out over using a little soy sauce.