This could just be a case of conflicting preferences, but I don't think it has to be. Clear contrasts are achievable without insisting on #000/#FFF web design.
- The most obvious improvement is simply keeping an eye on contrast. The article mentions using #333 over #000, but none of the unreadable samples provided are anywhere near that dark. #333 is approximately "light black" to the eye, and I suspect would give little trouble on a white background.
- Another trick is to vary one of background and text. Both Google and Apple violate this guideline by placing dark grey text on a light grey background. Again subjective, but offering a visual 'endpoint' seems to preserve clarity in a way that multiple shades of grey do not (perhaps it just encourages more careful design).
- Finally, we can choose colors which are not strictly grey. The HN background is a rather usable 244/244/235 - not far outside of light grey, but tan enough to provide more contrast than the pure brightness would imply. The vote/name options here are emphatically grey-on-grey, but it is at least a design choice to minimize their distractingness.