> PDF and JPEG
Add ELF [1] and Zip [2] to the list. Many common file formats have areas where you can insert an arbitrary chunk of data without significant side effects.
[1] ELF allows for a very flexible layout, and is almost certainly vulnerable to this length-extension-based attack.
[2] Zip allows a comment at the end of the central directory. Since the central directory is at the end of the file, I don't know if it's vulnerable to this exact attack.