Having said that, I think expectations on what is the minimal functionality have evolved, and we have responded by adding functionality like JSON in MySQL 5.7, and CTEs and Window Functions in 8.0. In terms of the specific issues you raise:
* utf8 vs utf8mb4 is "problem #1" http://mysqlserverteam.com/sushi-beer-an-introduction-of-utf... - we have switched the default in 8.0, and will deprecate utf8mb3 to reduce confusion: http://mysqlserverteam.com/mysql-8-0-when-to-use-utf8mb3-ove...
* Implicit truncation and automatic type casting is no longer the default (strict was enabled for new installs in 5.6 (2013) and all installs in 5.7 (2015)). That is, unless the standard specifies it should (there are some weird cases).
* 5.7 has virtual columns + indexes. This allows for a functional index.
Edit: Missed a word, added computed columns