A little while ago I wrote some docs for a project, a simple markdown readme basically, but the boss decided that all documentation has to be in sharepoint, so I converted it to a word doc and threw it in sharepoint. My takeaway lesson was not to not document anything though because I hate using sharepoint and Word for.
A top down command like "use x or get fired" isn't particularly helpful, making the right thing to do the easiest thing to do generally is though.
"What is the status of issue X?"
"What is the IssueID?"
"I didn't create one"
"Create an new entry in the tracker and we can all track progress of issue X"
Repeat as many times as necessary.
edit: I also try to create a trigger or other automatic action in the tool. For example, our issue tracker updates the release notes when items are modified or marked as completed. If you can get people to use the triggered tool it will create an incentive.