Sure. But it is a good first step, a must really when dealing with sensitive data. Proper encryption at rest, like let's say a 256 bit AES encryption with a symmetric key itself encrypted with a PKI key pair with private key physically stored on a separate physical machine and frequent key rotation procedures in place would go a long way towards protecting the data.
It's not 100% clear exactly what happened at Equifax so it's hard to tell if at-rest encryption would have helped, from what I understand the working theory is that apache struts CVE-2017-5638 was exploited but it's not 100% clear exactly what went on so yes encryption might have not helped in this particular case.