I really want to like CLion (it's pretty good, honestly) except I cannot stand CMake as a build system. Being able to use Kotlin Native with it sounds quite nice, because then I don't have to deal with CMake. It's a pretty solid IDE.
Honestly most of the time I use autotools. I hate autotools, but it breaks less often and is usually easier to fix when it does. CMake will occasionally just refuse to find dependencies or will generate bad makefiles for me on less-common OSes like QNX and even on the BSDs.
I did use Premake for a time which is basically like CMake with less awful syntax and doesn't pollute all your subdirectories with files. Don't expect it to work on OSes other than Windows/Mac/common Linuxes though.