I don't think having dependencies built into the language and/or compiler means it needs to be difficult to integrate with something like make. In fact gcc has dependency analysis built into it. It just knows how to output that information in a simple format that make can then consume.

I feel like this choice has more to do with early java culture and/or constraints as compared to unix/linux. With "the unix way" it is really common to solve a problem by writing two separate programs that are loosely coupled by a simple text based file format. When done well, this approach has a lot of the benefits of well done microservices-style applications built today. By contrast, (and probably for a variety of reasons) this approach was always very rare in early java days. It seemed for a while like the norm was to rewrite everything in java and run it all in one giant JVM in order to avoid JVM startup overhead. ;-) The upshot being you often ended up with a lot more monolithic/tightly coupled designs in Java. (I think this is less true about Java today.)