So the real world application (in terms of forward forecasting) seems like it's limited to cases where chaotic divergence between simulation and real world is due to simulation model errors rather than observation error - the latter is still a fundamental limit. Otherwise, this demonstrates that DNNs can be trained to solve diff eqs well, which is fairly well-trodden work.
As a result, claiming that this can enhance ex. weather prediction is highly misleading at this point, as nothing has demonstrated any prediction performance improvements under noisy observation, which is really the fundamental (and practical) limit in chaotic systems. While it still may be possible to use DNNs to do that (by ex. learning how to most accurately estimate the components of state with the largest Lyapunov constants) I don't think this work demonstrates the feasibility of that yet. The language in the paper is more reserved, in that they primarily claim that they can use the DNN to learn a dynamic model even with observation noise and then that model can be used to estimate Lyapunov constants accurately. That's much more reasonable.
I'm not sure what point you're trying to make. Matrices only perform linear transformations, so matrices only approximate functions linearly, which in general, is a terrible approximation globally.
I mean, there might be a case where we will finally get to the point where we are just "good enough" at measuring the boundary conditions to predict weather for the next year, but it has got nothing to do with obtaining the knowledge about chaotic systems themselves.
Chaos is defined as "small change in input -> large change in output".
Perception is actually the opposite, with small input changes (changes in light, different angles,...) leading to fundamentally unchanged perception ("It's a tree").
Second, it's definitely true that information processing systems, if they are to be reliable enough to be useful, are not going to be chaotic throughout their state space. They need to return the same output given a certain input. But I'd imagine there are also at least a few noisy regions.