I've used rclone for a very similar purpose. Restic, which is used in this post looks very interesting as well.

It's not the topic of the post, but database backups deserve a special mention. You can't just naively copy the database folder this way in most cases, you have to make sure to backup a consistent snapshot of the database. This is still not hard to do at smaller scales, when you can just add an exported dump of the database to your regular backup. But it is a point that needs some attention if you host the database yourself.