Hundreds of thousands in L.A. may have been infected with coronavirus: study
latimes.com
latimes.com
Population is supposed to be representative of LA county. Tests are from Premier Biotech with some preliminary data on false negative/ false positive rates shown. I suspect assumptions related to the test itself, rather than population, may be a bigger factor for any inaccuracies. There's also the question of whether antibody response implies immunity for SARS-COV2
Another interesting aspect of the result was 6% of men showed antibodies but only 2% of women tested.
Also: --2.4% of people between the ages of 18 and 34 had antibodies to the coronavirus --5.6% of people between 35 and 54 had antibodies --4.3% of between 55 and older had antibodies
Edit: The key assumption that really, really needs to be triply checked here is the specificity of the test. They're assuming 99.5%, similar to the Stanford study I believe. If it's closer to 98% then prevalence estimate confidence intervals should include 0%, I believe. Also should be noted that the same PI on the Stanford study, Jay Bhattacharya, is also involved in this. Same criticisms likely apply here - more caution needed!
Second edit: On further reflection, I think these studies could do serious damage based on how the results are being announced by press-release - in this case, afaik there's no pre-print. In our current environment this isn't just science. Policy is being enacted and people may die because of poorly framing results. Everyone involved needs to take a step back and think through this carefully. Also - did anyone figure out why a hedge fund guy was an author on the Stanford pre-print? And why that same guy then published a Wall Street Journal op-ed about the study without identifying himself as a co-author? Shady stuff.
This virus is much more transmissible than the viruses we usually deal with in humans.
If a virus has a low fatality rate, but is extremely contagious and prevalent, hospitals will get overwhelmed. A small percentage of a big enough number is itself a big number.
The subway and high-utilization of buses are likely factors in NYC vs. LA. LA is much more representative of the typical US city.
Frankly, I'm not sure why so many on HN are surprised by this. The scientific data on asymptomatic carriers coming out of Italy, Germany, South Korea, and Iceland has been very clear on a majority asymptomatic frame for this virus. I think that maybe authorities and responsible people are concerned that this information could lead to people flouting lockdowns more.
The optimistic take on this is: that means soon enough will be exposed that their immunity will stop the spread.
The pessimistic take on this is: we also don't have strong evidence that the previously exposed are immune, ie, have a strong enough immune response to stop the virus.
So either everyone in New York City was infected, or most probably 200-400k infected in LA is an order of magnitude of wishful thinking (e.g. ~2% false positive test rate.)
But also, NYC is considerably more dense, so diseases spread far more rapidly. Especially so considering heavy public transit use versus, what I would say is, extreme overuse of personal vehicles.
California local and state government being ahead of NY in issuing shelter-in-place orders even though NY was being harder hit even before the divergent response also makes a difference. But, yeah, the hyperdensity of the NYC metro area is a big factor.
Previous studies suggested that the strain circulating in NYC is of European origin, whereas the California strain, arriving earlier, was of Asian origin.
It's always possible that the NYC one is more fatal. We don't have data, but it is possible.
Thing is, though, at the peak, NYC was seeing a 60% positive rate on tests and is still seeing something near 30%. That pretty much guaranteed that the vast, vast majority of NY cases were not detected, and still probably are not.
(Italy is back around 5-6% again, for example)
It must be the case that a dramatic percentage of NYC is infected. Certainly not more than 100% as some oversimplified maths suggest, and likely not 80%+ that would be very comforting -- but quite likely between 30% and 45%, given the Stanford and LA studies, and the NYC testing data.
EG this from UK https://twitter.com/ONS/status/1252518098047041536
I love it when people have strong opinions about a complex, constantly changing piece of difficult science.
https://www.cebm.net/covid-19/covid-19-what-proportion-are-a...
"Setting: Diamond Princess cruise ship, Yokohama, Japan (n=-634 tested positive).
Proportion: 18%"
Also:
"23 Residents of a Long-Term Care Nursing Facility King County, Washington
10 (43%) had symptoms, and 13 (57%) were asymptomatic."
But then:
"Seven days after testing, 10 of 13 asymptomatics developed symptoms"
That means that just 3 of 23 remained asymptomatic there too, i.e. 13%.
It is estimated that the people mostly spread this virus exactly in the phase where they still haven't developed symptoms, and the virus can be detected. But that doesn't mean they will remain without the symptoms.
Especially as we know the disease affects these demographics up to 100X more than the young.
For instance consider: "Emerging evidence suggests many more people are infected than tested. In Vo Italy, at the time the first symptomatic case was diagnosed, about 3%, had already been infected – most were completely asymptomatic." [1]
[1] https://www.cebm.net/covid-19/global-covid-19-case-fatality-...
Not a covid-19 symptom.
EDIT: I'm wrong, sorry. Thank you to kgwgk for the correction.
Like you said, probably only 10% to 15% truly asymptomatic.
Because people on here panicked without thinking and don't want to admit it.
No one wants to say "Oh yeah, I ignored second year calculus and never bothered plotting logistic growth curves with the full spread of expected fatalities. Because of this I supported legislation that's started the next Great Depression. But I meant well!"
I can't speak for the original commenter, but I think the evidence increasingly suggests that we would benefit from allowing people to visit small groups of friends and run non-essential businesses.
I don't know if there is a "right" policy answer on what to do with something like that.
As someone else said, the lockdowns are probably illegal, you can't just throw away freedom of association over the flu. But if we didn't have them, we might have seen another 100k dead..
Where did you study constutional law? Rights granted in the constitution are subject to many restrictions. There is no explicit "freedom of association" in the Constitution, although it has been held to be implicit in freedom of speech. Free speech doctrine includes a "time, place, and manner" test that's applied to restrictions on speech when the government has a "significant interest" in the restriction[1] (e.g., national emergency for a viral pandemic). I don't know how the lockdowns (which are mostly not full lockdowns) would fare if Supreme Court were to apply the time, place, manner test, but I wouldn't presume to offer an offhand opinion that they're "probably illegal".
[1] https://en.wikipedia.org/wiki/Freedom_of_speech_in_the_Unite...
A law has to exist that gives states and the federal government the ability to do what they are doing and that law needs to not violate special protections built into the Bill of Rights.
With a state of emergency declared, some things can temporarily be enacted that under normal circumstances would not be legal.
I don’t know if all the lock down rules are legal, but I wouldn’t be surprised to find out that governments have overstepped their bounds.
As I've mentioned before, using CFR to determine fatality rate of the disease is like trying to determine the fatality rate of skydiving by measuring the ratio of people who go to hospital with skydiving injuries over those who recover. Obviously you'd think skydiving kills basically everyone who does it, but it just doesn't.
It's starting to become clear that the infection fatality rate of COVID is in the lower quartile of the range 0.25-1%.
And yeah, a huge portion of New York likely has it. It's super contagious.
The article says 221,000 infected at a 2.8% rate, in "early April". So they're assuming a 7,892,857 population. Currently, we have 601 Deaths total in LA[1], which we can assume are a result of early april event on April 20. So a 0.002% "fatality rate" relative to total exposures, "Woohoo" (NOTE, this is an optimistic figure implied by this study, the standard 2% [edited] previously claim but still not equivalent to the flu, which has 0.2% [edited] relative people who get sick). Now, with weekly doubling: 221,0008 = 1,768,000 infection now = 22.4% - > 4808 deaths. However, past 10%, we can ask whether we start reaching saturation/diminishing returns. But that is a key question.
-- Let's look at NYC. There we have 14,500 Death. Using the article's implied figure, 14,500/ 0.002 = 7,250,000 infected on April 1, out of 8,398,748. So this implies an infection rate of 7,250,000/8,398,748 = 86.32239%, which, in fact, seems very implausible and which implies; a higher death rate among "vulnerable people". Maybe we're about to hit full saturation with NYC and see an immediate decline.
Now, the other bad* scenario is the possibility that a lot of sickness and death NOW is being driven by reinfection, that exposure isn't giving much immunity at all and instead of the unexposed dying, what we're seeing is the re-exposed dying and with this dynamic, the death rate settle into a steady and unacceptably high level. Note that Italy, which has seen a high death rate, hasn't a strong drop-off at all, just gradual plateauing. IE, guess what, one possibility is "herd immunity" just doesn't exist for this virus.
Anyway, time will tell, literally a week will tell if NYC has enough fatalities to make this 0.002 exposure-to-death rate numerically impossible.
[1] covid-19.live
Edit: corrected conversion ratio to percentages.
It seems weird to think the body can clear an infection but have no ability to fight it later.
There's been only a very few cases globally where a person who previously tested negative later tested positive, for which a test giving a false negative is a much more likely explanation - especially as these cases were early on when tests were more unreliable. Otherwise - everybody else who tests negative does so consistently.
The virus is very similar to the original SARS (genome about 80% the same which is huge). It is a relatively stable by virus standards not mutating massively. In fact, if you had SARS your are likely immune from covid19: https://marlin-prod.literatumonline.com/pb-assets/journals/r...
So the general scientific consensus I have seen is that there's no evidence to suggest covid19 is some sort of supervirus that will reinfect people and defeat your immune system.
There's also been some animal testing on reinfection : https://www.biorxiv.org/content/10.1101/2020.03.13.990226v1
I add this point because most of speculative arguments are used to claim allowing the virus infect a large portion of population won't cause much harm.
Regional differences? Lombardy's death rate is less than half of peak
Italy has had 24114 deaths. If take those as being in Northern Italy with a 27,000,000 population, that's 0.8931 % of the entire population. Even adjusting for age, that can't squared with 0.002% death rate [wrong wrong, it's 0.08931%, which is possible but with a huge infection rate, which maybe].
For example:
> So a 0.002% "fatality rate" relative to total exposures,
You appear to be deriving this from the computation 601/221000. That gives .27%, not 0.002%.
> Italy has had 24114 deaths. If take those as being in Northern Italy with a 27,000,000 population, that's 0.8931% of the entire population
No it's not. 1% of 27M is 270k, not 27k.
This would explain: NYC vs LA vs Italy. Why isn't this theory brought up more?
"Wang, whose full name has not been disclosed for privacy reasons, is one of more than 100 reported cases of Chinese patients who have been released from hospitals as survivors of the new coronavirus — only to test positive for it a second time in the bewildering math of this mysterious illness."
https://www.latimes.com/world-nation/story/2020-03-13/china-...
Because if reinfection so close to recovery were possible, it would make this virus really unique, and it doesn't really fit the available data very well. It makes much more sense that the virus takes a long time to clear after symptoms abate, and the tests have a really lousy false negative rate.
Moreover, if a lot of Covid infections are in the area and the virus is mutating quickly, a person might be exposed to a different strain soon after recovery and wind up infected, if the SAR-COV-19 is similar to the common cold. This would be hard to notice, since it would tend to happen as the virus was spreading rapidly anyway. It would become a problem only if people expected the virus to abate once everyone had been exposed.
See: https://www.technologynetworks.com/immunology/news/why-dont-...
This kind of speculation is relevant to the more irresponsible approaches; "developing herd immunity" and "immunity certificates" but it mostly should be a reminder to "don't do that because you really don't know what you're getting into".
As compared to the IFR: "The term infection fatality rate (IFR) also applies to infectious disease outbreaks, and represents the proportion of deaths among all the infected individuals. It is closely related to the CFR, but attempts to additionally account for all asymptomatic and undiagnosed infections." [1]
One's the risk that given you show up at a hospital, you die. The other is the risk given that you get infected, you die.
https://www1.nyc.gov/assets/doh/downloads/pdf/imm/covid-19-d...
The worst flu season we saw in a decade killed (~80k / 300M) = .02% of the US population. NYC has seen ~14000 deaths, or .18% (~14k / ~8M) death rate for the entire population, and while the absolute worst may be over, people are still dying at a high rate in NYC.
The only way I can make sense of this is that you're somehow mixing figures relating to deaths in healthy populations (COVID) vs. overall death rates in flu (including older/unhealthy populations).
On the other hand, there's one very specific way that considering NYC gives us data we can't (yet) get elsewhere. While it's possible that we're underestimating disease prevalence by 50x elsewhere, it's basically impossible in NYC (almost 2% of people already have tested positive, with less than 10% of the population being tested).
Depends on whether mortality rates can be variant on environmental conditions, such as viral load, population density, access to healthcare/ICUs, population socio-demographic profile, etc.
If we don't develop herd immunity ASAP, and instead pursue a course of lockdowns, as soon as we lift the lockdowns (either voluntarily or because people just walk out -- see the midwest), we'll immediately start playing rolling lockdown whack-a-mole as China is. The first contagious person who flies in from a foreign country (or domestically) without perfect lockdowns will re-ignite the wildfire.
We should do exactly what Sweden is doing and what the UK proposed: isolate and provide support services to those who are at risk, and let out those who aren't. I think it speaks volumes that Sweden's new infection rate stabilized at the same time as the rest of the world but without lockdowns.
It's really the only path forward. Is it perfect? Of course not. People will die. However, there's no world in which about 70% of the population won't get the disease before the vaccine arrives, so we need to control who gets it, when, and in what order, to minimize harm.
While I agree mostly with your assessment, it's worth mentioning that the lack of official lockdown in Sweden doesn't mean there isn't a lockdown. According to Google's mobility data for Sweden, their lockdown activity looks pretty similar to what we see in the US. People are voluntarily staying home.
Since Sweden doesn't have a lockdown, this statement is meaningless. A major objection to lockdowns is their involuntary nature. In general, there is a big difference between choosing to stay home, and being coerced (with the threat of force) to do so. One is "choosing to do what you believe is best", the other is "prison".
It's a creative interpretation of the facts.
One important note: it's impossible that NYC is overestimating cases by 100x. Close to 2% of NYC has confirmed cases.
Here's one for the UK: https://twitter.com/ONS/status/1252518098047041536
[1] https://fee.org/articles/sweden-s-top-epidemiologist-covid-1...
[2] https://aatishb.com/covidtrends/?location=Canada&location=Sw...
Absent the data from widespread testing, the spread of the disease was consistent with two epidemiological models -- low-contagion/high-mortality and high-contagion/low-mortality. In the latter model, there's not much to be done to stop the disease from infecting the population at large, and not that much that needs to be done, since the vast majority of people will emerge unscathed. But in the former model, it matters tremendously -- doing nothing will slowly but surely result in vast loss of life but quarantines can stop the disease dead in its tracks.
Therefore the most cautious course of action, from a public health perspective, was to assume the former and proceed with a regime of extreme social distancing. Unfortunately doing so had dire economic consequences.
Sweden has about 23 active cases for each one recovered. The US is about 10:1, Europe overall is about 2:1, so is Italy, and Spain is close to 1:1. Asia as a whole is about 1:1.
[edit] I misread, disregard, but preserving for posterity.
Now, 11/100 blood givers in Stockholm who has not been sick in the last two weeks have antibodies according to researchers.
That gives you a naive mortality rate of 0,4% per infection, assuming the spread among bloodgivers is the same as the population in general and just dividing the death count by 11% of the population. It is a high eastimate as I guess many wont get traceable antobodies and mostly asymptotic people give blood.
[1] (Swedish) https://www.folkhalsomyndigheten.se/publicerat-material/publ...
So no.
The coronavirus bans on public gathering are fairly clearly permissible under SCOTUS precedent.
That's a whole lot of people left out of your number. A quick google suggests that 1/3 of Americans have hypertension and 9% have diabetes. It seems like probably the majority of the US has at least one of these underlying illnesses.
And this report relies on figures that diverge dramatically from the COVID death tolls. It lists the current total report as around 15k, when we're close to 3x.
Here's some more data. What I'm saying (that it's approximately the same as the flu for the young, with some early evidence pointing to it being better) isn't particularly controversial and well supported by evidence [1] (also older, April 14th). CDC as of late March "... no ICU admissions or deaths were reported among persons aged ≤19 years. Similar to reports from other countries, this finding suggests that the risk for serious disease and death from COVID-19 is higher in older age groups." [2] In Italy nobody under 30 died, and only 5 people between 30 and 39, as of April 19th -- yes in spite of a CFR of what, 13.22%? [3, 4]
More data as of April 20th from Oxford [4]. Scroll through all the data the world has to offer, I'm not wrong on this. I repeat, the facts you're arguing with me over, without citing data to support your case are not controversial. Surprising maybe, but not controvercial.
Especially when you consider (an albeit bad flu): the overall case fatality rate as of 16 July 2009 (10 weeks after the first international alert) with pandemic H1N1 influenza varied from 0.1% to 5.1% depending on the country. [4] The flu can absolutely be very bad is the take away there. And yeah this is worse than the flu, by around 3X on both ends of that range. Not bad, not great.
> It lists the current total report as around 15k, when we're close to 3x.
They actually address that critique, that it takes a few weeks for case data to be finalized and reported upwards, so the CDC data can be up to a few weeks behind. It's not divergent, it's delayed. This is a live list updated and maintained by the CDC. Make of that what you will.
[1] https://www1.nyc.gov/assets/doh/downloads/pdf/imm/covid-19-d...
[2] https://www.cdc.gov/mmwr/volumes/69/wr/mm6912e2.htm
[3] https://www.bloomberg.com/news/articles/2020-03-18/99-of-tho...
[4] https://www.cebm.net/covid-19/global-covid-19-case-fatality-...
So it seems like there should be no possible way to frame it as less severe than the flu, even only comparing to when the flu is at its worst and even assuming 100% of the population has covid or whatever other extreme things you want.
If we compare this with complete shutdown of all public activity on the other end of the spectrum, we can see there are things we could be doing that are on neither ends. Maybe distancing but not shutdown, or avoiding some mass gathering but still being ok with individual meetings, or having places like restaurants operating at reduced capacity to ensure people aren't too close to each other, or ask people to wear masks when they enter stores, etc. And strict lockdown for places like nursing homes, but more relaxed for places like college, or having people of high-risk groups to work from home, but people with lower risk be allowed to work in the office. I'm not saying it's the right way to do right now, but it's a possibility, there are options.
So if this is e.g. 50 times worse than the flu, then trying any of the above may be too risky. But if it's kinda sorta like the flu, maybe somewhat worse but not 50x worse - then it may be prudent to consider measured response, given that for the flu we basically have no response at all and we're ok with that.
None of us know for sure, but isn't it plausible on the face of it that something 10x worse that could easily become 100x or 1000x worse warrants the lockdowns? I don't know if this is common sense, but in an alternate universe it could be.
That seems impossible. CDC estimates 61k flu deaths in 2017-2018 and 34k in 2019-2020: https://www.cdc.gov/flu/about/burden/index.html
That is nowhere near 1.3k per day.
If we assume that COVID is spreading like wildfire (it is), and that we're front-loading the cases (we probably are), and that immunity will be built up as one-off instead of like having the disease mutate substantially every year like the flu, over a few years, it could easily be better.
I'm not saying it is or isn't, just that there is a path.
One factor could be the nature of transmission. Regions where transmission occurs with high viral loads entering at the point of infection (for example, hospital-acquired infections) could see more severe disease progression. You would therefore expect a high hospitalization rate relative to prevalence. It's possible in other regions, including CA, hospitalization rate as a function of prevalence is lower because acquisition is largely at lower viral loads resulting in less rapid and severe disease progression. This is, of course, a hypothesis and very likely not correct. Time will tell.
Other important factors include age distribution of infection, as well as weather conditions and prevalence of pre-existing conditions.
I can't tell you how many people ride the subway every day, but it's certainly less than half of the number of rides per day.
One way to explain the hospital surge in NYC is that a small percentage of people have had a highly fatal disease. Another plausible explanation is that a much larger number of people have had a less-fatal disease.
To date, we've had very poor estimates for fatality rates and prevalence. It wouldn't be shocking at all to find out that we're off by a factor of 10-, 20-, or even 50-fold.
That isn't impossible at all, given that the population of NYC is around 8.8M people. It would mean that the city is approaching herd immunity.
(I don't personally think the ratio will be as high in NYC as in LA, but that's just a hunch based on the higher testing rate.)
Also, having antibodies and being hospitalized is a very different thing. If a lot of the cases are asymptomatic or very light you won't see hospitalizations and you'd never know the person had an encounter with the particular virus until you do mass testing. And NY is quite different from LA, as far as I know, in terms of how dense population can be and how much people use mass-transportation and other high-risk scenarios, and the probability of being hospitalized may also depend on that (in other words, it may matter not only whether you had any contact with the virus, but in which circumstances and how much of the contact you had).
That doesn't prove the study is true of course, but I don't see anything from comparison with NY that makes it implausible on its face.
[1] https://www.cebm.net/covid-19/global-covid-19-case-fatality-...
15.6% of pregnant woman at a given hospital were PCR confirmed over 2 weeks. I haven't seen strong arguments this wouldn't be broadly characteristic of the overall population. Worse (or better depending on how you look at it), there's significant false negatives with PCR testing.
It's credible NYC could be at 30% by April 4 and given that confirmed cases doubled since then, could be at 50%+ by now.
Everyone is eager for these results, because there’s a good chance that the true case count is higher by anywhere from 2x to 100x. If it is, then proportionally fewer people are expected to die as the virus eventually does churn through the whole population.
It’s probably still too early to tell, but this is promising.
But just from a logical perspective it follows clearly from this data, and there's nothing fundamental about the situation that makes it particularly unlikely.
Of course it's quite possible that the LA data isn't really applicable for any number of reasons. But the idea that COVID will run through dense populations mercilessly, but quickly, and then sort of peter out is completely within the range of possible and non-shocking outcomes.
It's the natural outcome of an extremely communicable disease with a large prevalence of asymptomatic transmission and there's plenty of corroborating evidence for the idea that this is one of those.
It's also quite likely that the false-positive rate with this test is super high. Who knows.
The tobacco smoking rate in New York is 14.1%; it's 11.3% in California. Some difference, yes, but far less difference than you see between either and some rural southern states where the numbers can be roughly double that.
The people are probably healthier too.
http://img.bj.wezhan.cn/content/sitefiles/2005911/images/132...
Stanford reports doing a 30-person validation test with pre-COVID-19 hip surgery patients (100% negative). But this is not enough to validate these population-scale tests, especially when 98.5% specificity (rather than 99.5%) would fully invalidate the headline result.
Hmm - I guess I should now go to the source - but from the other link: " test validation included a total of 30+371 pre-covid blood tests, and only 399 of them came back negative." https://statmodeling.stat.columbia.edu/2020/04/19/fatal-flaw... - I think I trust it more
https://www.bostonglobe.com/2020/04/17/business/nearly-third...
It seems like they should be doing multiple tests, as independent as possible, per blood sample, and seeing if they agree?
That is interesting. So far, men are more likely to die of covid-19 (almost a 2:1 ratio) than women; if this is a repeatable result it would seem to suggest that the reason is that fewer women are becoming infected, not that women are somehow less likely to exhibit extreme symptoms when infected.
If I'm being honest, whether it's logical or not I wouldn't be surprised if this is politics and misinformation starting to creep it's way into science. In current events there's a struggle to open up the economy with Trump saying we're ready and the that governors are at fault for keeping everything closed while the are governors saying it's way too early and they need to keep everything closed. This may be an attempt to make the public think the situation is safer than it is (if more people have been sick than thought then we could potentially have herd immunity or be closer to it) which the public can then put pressure on the governors.
Who knows, but I will say it's getting harder and harder to say some thing are too tin foil hat lately.
[1] https://www.commondreams.org/views/2020/04/20/trumps-reelect...
Because even if the IFR is around 0.5% then that still works out to > 1,000,000 people dead in the US in an uncontrolled spread scenario.
It would have to be another order of magnitude lower than that to be comparable to the seasonal flu.
Source suggesting this: https://www.medrxiv.org/content/10.1101/2020.04.12.20062943v...
I think it has been pretty obvious that IFR is not 3% for a long time. Imperial College had dropped it to 0.67% in China 3 weeks ago (https://www.thelancet.com/journals/laninf/article/PIIS1473-3...)
It seems like a learning problem with noisy labels. Does anyone know what they do in practice? Especially chaotic situations like this where there aren't reference tests? Are there reference positive and negative samples?
One concern also referenced for the Stanford study was that, as mentioned in a USC popular writeup on this study linked elsewhere on this post,
> Premier Biotech, the manufacturer of the test that USC and L.A. County are using, tested blood from COVID-19-positive patients with a 90 to 95% accuracy rate.
They must be factoring this into the 2-5% infection rate number somewhere?
This post describes the issues: https://medium.com/@balajis/peer-review-of-covid-19-antibody...
See also this thread: https://news.ycombinator.com/item?id=22924118
https://statmodeling.stat.columbia.edu/2020/04/19/fatal-flaw...
I'm sorry that literally all of the seroprevalence data hurt your priors. But the virus is widespread, not very deadly, and people are going to go back to work soon. You can stay home. You will be safe at home.
See Gelman's article on the topic.
https://statmodeling.stat.columbia.edu/2020/04/19/fatal-flaw...
I am similarly skeptical of the findings here.
>Positive results may be due to past or present infection with non-SARS-CoV-2 coronavirus strains, such as coronavirus HKU1, NL63, OC43, or 229E
[1]https://imgcdn.mckesson.com/CumulusWeb/Click_and_learn/Premi...
"But some COVID-19 antibody tests, including those being used by public health departments in Denver and Los Angeles and provided to urgent care centers in Maryland and North Carolina, were supplied by Chinese manufacturers that are not approved by China's Center for Medical Device Evaluation, a unit of the National Medical Product Administration, or NMPA, the country's equivalent of the U.S. Food and Drug Administration, NBC News has found.
Two U.S. companies — Premier Biotech of Minneapolis and Aytu Bioscience of Colorado — have been distributing the tests from unapproved Chinese manufacturers, according to health officials, FDA filings and a spokesman for one of the Chinese manufacturers. Many of the unapproved tests appear to have been shipped to the U.S. after the FDA relaxed its guidelines for tests in mid-March and before the Chinese government banned their export just over two weeks later.
If COVID-19 antibody tests are unreliable, they can produce false results, either negative or positive, health officials said. The use of such tests has been widely discussed as a way to ensure that employees are healthy enough to go back to work and to find COVID-19 survivors who may be able to provide blood plasma to severely ill patients.
Officials at the Association of Public Health Laboratories have expressed concern about the reliability of the numerous antibody tests being sold or used across the country with little scrutiny. "
see: https://www.nbcnews.com/health/health-news/unapproved-chines...
Is it also possible different strains are dominant in California and NYC with different mortality characteristics? There is also the issue of weather. A recently leaked DHS report indicates sunlight radically reduces virus half-life and it's also affected by temperature and humidity. Maybe subway + weather + (possibly) strain of differing virulence can explain the discrepancy?
https://en.wikipedia.org/wiki/List_of_United_States_rapid_tr...
Overall population density is much higher as well:
https://en.wikipedia.org/wiki/List_of_United_States_cities_b...
NYC also has the lowest car ownership in the nation, so you're basically left with walking or uber/taxi/public transportation just to get to the store/doctor/etc.
https://www.governing.com/gov-data/car-ownership-numbers-of-...
Also ~25% more airline traffic hauling bugs in from everywhere.
https://en.wikipedia.org/wiki/List_of_busiest_city_airport_s...
Combined with a long transmissable dwell time before symptoms, wouldn't surprise me if 90%+ of the people in NYC were materially exposed.
Italy has the oldest average population in Europe, and Lombardy has the oldest average population in Italy. 99.2% of those who died in Italy averaged 80.5 years old and had an average of 3 co-morbid conditions. [1]
[1] https://www.bloomberg.com/news/articles/2020-03-18/99-of-tho...
https://www.cbc.ca/news/covid-19/italy-covid-19-outbreak-les...
So far the data is clear: it doesn't really do much to young people. [1] Speaking broadly, almost nobody under 20 has died, practically nobody under 30 has died, and a handful of 30-40 year olds have died. The trendline is super clear: if you're young, you're gonna be just fine. The CDC says young folks aren't even likely to wind up with serious disease or in the ICU ("no ICU admissions or deaths were reported among persons aged ≤19 years. Similar to reports from other countries, this finding suggests that the risk for serious disease and death from COVID-19 is higher in older age groups.") [2]
When I say "affected" I mean that they are not likely to develop serious symptoms, certainly severe symptoms and they're definitely not likely to develop life-threatening symptoms.
[1] https://www.cebm.net/covid-19/global-covid-19-case-fatality-...
[1] https://www.forbes.com/sites/lisettevoytko/2020/03/04/discov...
Sure, mutations happen all the time, however since the virus has error correction those are rare and very unlikely to have any effect on the phenotype.
When articles like this compare the number of known cases detected with the PCR diagnostic tests with the higher estimate based on antibody testing, they're comparing the sum of all cases detected since the start of PCR coronavirus testing with a point-in-time estimate of the proportion of the population that currently has antibodies for exactly this reason.
FWIW, Queens and Brooklyn (Kings county) are at 50.7% and 48.3% positive tests respectively.
https://covid19tracker.health.ny.gov/views/NYS-COVID19-Track...
Today: Kings 548/1835 = 29.9% and Queens 786/2428 = 32.4%
What about average age? Number of icu beds? Effect of temperature/humidity on the virus? Population density? &c. There are so many variables
[1] https://www.worldometers.info/coronavirus/country/us/
edit: typo
Death numbers are overreported in general - Dr. Birx herself even claimed that if you test positive but die of something other than the virus they track it as a COVID death. It's preposterous.
https://www.politico.eu/article/why-is-belgiums-death-toll-s...
https://news.usc.edu/168810/usc-covid-19-antibody-researcher...
The participant selection here was done differently, but the same problems arise with the false positive rate of the tests.
> The initial results from the first large-scale study tracking the spread of the coronavirus in the county found that 2.8% to 5.6% of adults have antibodies to the virus in their blood, an indication of past exposure.
> That translates to roughly 221,000 to 442,000 adults who have recovered from an infection, according to the researchers conducting the study, even though the county had reported fewer than 8,000 cases at that time.
So, in the 2nd paragraph, there, a match for SARS-COV2 antibodies means an exposure. In the 3rd, it means an infection. I have always understood that exposure != infection. Yes, the former is a necessary precondition to the latter, but an exposure doesn't automatically and unconditionally become an infection.
But then it occurred to me that the body probably isn't going to be generating antibodies unless a pathogen got past the body's initial lines of defense and required a more active response from the immune system. In which case then, perhaps it would be accurate to say antibodies == infection. Are we speaking then of asymptomatic carriers or those who never experienced more than mild symptoms and might not have realized they were infected?
Am I splitting hairs here? Is this simply shorthand for "exposure that subsequently became an infection?", much in the same way I might freely use "LDAP Server", "Name Server", "Domain Controller" "Auth Server", to all refer to the same system in an on-prem Windows environment? Or, am I rightly objecting to unclear language that would lead to incorrect conclusions?
https://nextstrain.org/narratives/ncov/sit-rep/en/2020-04-17
https://nextstrain.org/help/coronavirus/FAQ#is-one-strain-of...
89% of total fatalities in New York have at least 1 comorbidity. I wonder to what extent anyone with unknown cause of death or death due to cancer, but also had COVID-19 gets lumped into the death due to COVID-19 category.
[1] https://www.nytimes.com/interactive/2020/04/10/upshot/corona...
In more detail: https://statmodeling.stat.columbia.edu/2020/04/19/fatal-flaw...
This USC study seems to have recruited differently: "Participants were recruited via a proprietary database that is representative of the county population. The database is maintained by LRW Group, a market research firm" Via: http://www.publichealth.lacounty.gov/phcommon/public/media/m...
edit: typo
Given the CI's of the specificity all 50 positives could have been false positives so we can't conclude anything from the study.
We know that the initial major outbreak in NYC was with a strain from Europe, while the initial major outbreak in California was with an Asia-origin strain.
These might be differently dangerous. If the NYC/Europe strain is just 20%-30% more fatal than the Asian one, the maths all start being believable (you start saying that 30-45% of NYC has been infected -- which, unlike 60-100+%, is quite believable.
It seems likely that some vulnerable neighborhoods in NY have effectively everyone infected, but that is probably not universally true.
It also seems quite believable that we are nearing the point where the majority of folks in NYC have been exposed. If nothing else, the subway is still seeing quite active use, and must be a breeding ground for infection -- and yet, hospitalization has started declining, meaning that new infections are slowing down -- meaning that at least among folks that still go out and about, there must just be fewer people to infect.
With subway use still being as high as it is, it seems like it must be true that, amongst the population using it, R could only fall below 1 if herd immunity (in the rider population) was beginning to form.
This also jives with the numbers we are seeing, where reported cases are down despite both increased testing and looser counting.
The vast majority of our non imported cases have also been successfully contact traced, people by and large seem to be contracting it from other confirmed cases.
https://www.theguardian.com/society/2020/apr/20/studies-sugg...
It was also based on tests collected from blood donor samples, so none of the specific bias of the Stanford study (which to me also seems like a huge flaw even if other sources of evidence are pointing to similar IFR numbers and undercounting)
In any case, the Swedish findings cited for Stockholm in the analysis linked to in this COVID19 subreddit post indicate a similarly low overall IFR of far below 1%.
It is worth noting that blood donors would probable tend more towards youth and general good health, which could skew its demographic profile. Also, depending on donors' motives for donating (maybe they thought it would include a COVID test) could skew results in different and unpredictable ways.
https://www.reddit.com/r/COVID19/comments/g4znbg/at_least_11...
I highly recommend that people read https://statmodeling.stat.columbia.edu/2020/04/19/fatal-flaw... for information about for information on how the Santa Clara study messed up. TLDR: Incorrect statistics, incorrect analysis, and incorrect sampling probably led to a vast overestimate of both prevalence and certainty in that high prevalence estimate.
Current stats from [https://covid-19.direct/county/CA/Los%20Angeles]: Confirmed cases: 12,349 Deaths: 601 Population: 4M Implied fatality rate: 4.87%
If this study is correct (~4.2% prevalence): Cases: 167,580 Deaths: 601 Implied fatality rate: 0.36%
There is massive difference between the appropriate response to an illness with a 5% fatality rate and an illness with a 0.36% fatality rate.
Worth noting that .36 is roughly 3x as deadly as the flu.
[1]: https://reason.com/podcast/we-make-the-weather-why-voluntary...
The evidence will continue to build that this virus is pretty benign compared to all of the fear mongering has been suggesting. Of course, HN downvoted me when I suggested this last time https://news.ycombinator.com/item?id=22685457
Lets ballpark and say it's 3x more deadly and only 3x more people get it than the flu, 40M * 3x * .0003 == 36k deaths. However, we've blown past that many deaths already, and we have nowhere near 120M infected people so far, so the math just doesn't work. It's far more than 3x more deadly than the flu, or we have far more infections than we can account for in any study.
Also keep in mind that the death statistics have largely only counted people with positive tests who died in a hospital, so it's going to be strictly under counting.
Sweden didn't shut down and their health system isn't at the point of any of those locations. [They have a lot of people dying though - so that's not to say not shutting down is a good idea].
It's also pretty unclear from Seattle's trajectory pre-lockdown it was every going to be overwhelmed if it didn't shut down.
There's a chance you're right, and people want this to be true, but when you're wrong you're very wrong and people die.
Of course there isn't any. Sure, it would matter if this were a buzzfeed listicle about "most dangerous viruses of all time". The flu might be higher in that list. But the actual question is "given this virus, which we don't have acquired immunity to, and don't have a vaccine for, how many people will it kill, and what are reasonable steps to lower that number"?
Only NYC has gotten anywhere near their capacity, and even there (as far as I know) nobody has been denied care due to insufficient resources. Many hospitals in other areas are mostly empty and even cutting shifts, e.g. https://www.insidesources.com/unexpected-consequence-of-covi...
Is there? What is the appropriate response to 0.36%? The flu has a mortality rate of 0.1%, which seems comparable, except we all have some immunity from having the flu multiple times in the past. Flu shots are available for vulnerable people. So while people on average have a 1 in 1000 chance of dying if they get the flu, they also only have a 1/40 to a 1/7 chance of getting the flu at all. The probability of getting corona virus appears to be much, much higher for people exposed to it, and we have no idea what the rate of infection could get to if we let it run free and behaved normally.
LA proper has about 16,000,000 people.
This study should be taken with a grain of salt either way for now.
And no 863 is not representative of LA. LA is made up of individual communities and some never leave those communities. Some communities are pass through for commuters. Really important where those 863 are from. All are 863 from a small area? Are some from Pasadena and other from Santa Monica. What about Covina or Redondo? LA or Beverly Hills.
If it seems to be a highly spreadable virus, and a small percentage of the population has contracted it, then a significant reduction in the current societal restrictions will cause a spike in new infections, which leads to hospitalizations, ventilators, and deaths.
If a large percentage of the population has contracted it, and the results we have seen are due to that, then there is less risk in re-opening things.
I can't speak to this study's bearing on that, but it's one good reason to care how much of the population has already contracted the virus.
Right now we're on the edge of a precipice. My read of "the people" is they will hold off a bit longer if some reasonable-sounding fact-ish based plan comes out soon. It can be a little wrong, but it has to be credible. Knowing how many people have had it, and whether or not those people are now safe, is imo the two biggest components of planning the next steps. If we can't get credible answers to those questions soon, I believe the population will just start making decisions based on hunches/beliefs/feelings/etc. Some will remain isolated, others will rebel. It won't be pretty.
Not that we should be considering "natural" herd immunity under any circumstances. It's a horrible idea.
Every passing day more data and studies are reflecting the realities of this disease not being as deadly as imagined. So perhaps, just like chickenpox, its better to just get it as a kid then to face it later as an adult.
--- Globally, about 3.4% of reported COVID-19 cases have died ---
That was used as a basis quite a few decisions, how to treat patients, when to close / open various locations, etc. It does say "reported" in the report, but I think often that part of ignored and many officials assumed it to be as a rate based on infected cases.
The article does mention this issue, and I wonder what the new / updated mortality rate is then based on this data.
No credible source that I saw ever suggested that the IFR was 3%, and that is not what any decisions were based on. Everyone knows that some cases will be missed. The early IFR estimates were all huge ranges like 0.1%-2%, precisely since there was so little information early on about how many cases were not being detected. (And it is surprising how little we've managed to narrow that range down).
There are other claims in that WHO link that are obviously wrong in retrospect. E.g. the claim that Covid transmits less efficiently than the flu.