As far as I can tell, the development models also differ significantly: The LibrePCB devs seem to be focused on doing things the right way the first time such as having a proper operation-based undo/redo stack whereas horizon just stores a copy of the whole schematic/board for undo/redo. They also seem to focus more on simplicity for beginners rather than more advanced features such as length tuning and advanced design rules.
Putting development effort where I like enabled me do to the board for my master thesis https://github.com/carrotIndustries/x-band-tx/ (4 Layers, differential pairs, length-matched traces) in Horizon EDA only after about 2 years after the initial beginning of development.