After the decision, it says rejections rose 31%, but now they have fallen back down.
The EFF contends this is because the Patent Office is ignoring the law, but they don't offer any evidence to back up this assertion. Another likely explanation is that patent applicants are adjusting their applications to be in line with the decision, and thus the rates have gone back down.
This assertion by the EFF would only make sense if patent applicants didn't know about the rule change. But applicants do know, and have adjusted their applications accordingly in the intervening time.