IIRC good performance of ssd requires slightly modified formatting parameters. I'm not sure if this is still true, though. Anyway, with different block sizes etc. I'm not sure if cloning works, does it?

On windows, unfortunately information essential to running an app is stored in the registry and the files are scattered over several directories. So windows users might have to reinstall the stuff -- which could turn out to be a good thing anyway if you were already running your windows system for a long time of period.