Ideally, they could leverage Rosetta2 to run x64 containers under macOS on Apple Silicon ... but I guess Apple isn't playing ball (because otherwise they would have probably announced it at WWDC).
At this point I see an Apple Silicon based Mac is just a consumer device, I don't think I'm going to be able to use it in anger for development work at the moment (other than for Mac consumer apps).
Not really sure what Apple have to lose here ... but if Macs with Apple Silicon are not a viable dev platform for "mainstream" containers, then that's going to drive developers to Linux (or Windows).