I guess one can construct rational arguments for turning down money if one doesn't believe in capitalism or economics or money, but that doesn't make the act of turning down money economically non-rational.
If you consider "economics" to deal only with maximizing money, it's economically non-rational to decline this prize. If you consider "economics" to deal with maximizing utility, it could easily be rational to decline this prize.
If he had a family to support, it might be a different matter.