I wouldn't confuse Project Reunion and the arbitrary Windows Store requirement that apps be compiled with .NET Native. A requirement that, frankly, is on borrowed time anyway and I can't envisage it surviving much longer. Once .NET 6 delivers Mono-style AOT support - .NET Native's sole remaining purpose will cease to exist. Not that modern hardware ever needed it. It was intended for Windows Phones.
If the choice facing us was a simple as you describe then, for example, we wouldn't have ended up building a UWP app in F# back in 2018, would we? Not everything is black and white nor zero sum.