Just look at this from a risk management perspective. Chance of aircraft being surprise-attacked in extremely well-defended airspace during peacetime: essentially zero. Consequences of that aircraft being surprise-attacked: loss of one aircraft and crew.
Chance of inadvertent release of weapons and/or countermeasures when switched on: apparently not zero, given the trainee's response. (An automatic response that I would be very, very, very pleased to see as an instructor!) Consequences: potential loss of civilian life and/or property.
So you have zero * (1 airplane + 1 crew), versus non-zero * (? civilians + ? buildings). I know which side of that inequality I'm landing on.