I don’t think you can just use E=mc2 in that case. The rotation of the star is so high that you have to consider relativistic angular momentum effect in the equation: https://en.wikipedia.org/wiki/Energy%E2%80%93momentum_relati...
BTW these stars emit a lot more than neutrons just in case the GP thought due to their name that that's what they emit mostly. Most of the emission of neutron stars is electromagnetic radiation (EMR) aka photons.
Actually neutron stars have two ways to lose energy: slowing down their rotational speed ("spin down") and losing mass. Which one of these contributes more to the EMR varies. For magnetars for example, only about 1% of the radiation is thought to be powered by rotation and for those we could actually use E = mc^2 to calculate how much rest mass the star is losing due to its radiation.
That's my layman understanding at least :)