On the extreme end, there's the energy cost of building the machine and engineering its components. For the vast majority of these, we can probably all agree that were a fusion power plant to be built, the net gain would fully eclipse these initial inputs fairly quickly. This may sound silly, but remember that the economic context where fusion so often sits is one that centers on renewable energy and sustainability. These costs do have to be accounted for.
On the other end, there's the energy cost consumables. For example, the deuterium and tritium fuel input into the device, which need to be purified (deuterium from water, possibly tritium from the atmosphere) or otherwise isolated (from what I understand, tritium is a byproduct from fission reactors and they serve as its primary source in scientific applications). It may well be that the energy cost of acquiring these consumables is fractions to fractions of a fraction of the energy cost of running the device, effectively constituting a rounding error. But I think when we're talking about net gain, a clear definition and accounting of the input energy required to run the experiment would be useful to communicate to the public.
I hope we see disclosure of these details with all the expected caveats when the peer-reviewed article goes to print and journalists have another feeding frenzy.