(As a side note, one reliable indicator of thread deterioration is when people start arguing about what each did or didn't say.)
Instead of putting down the other person's knowledge level, it would have been better to share* some of the specific goings-on of early cipherpunk mailing lists, since you obviously know something about that. That would have gratified the curiosity of the general readers (me included!) and this is more important—it is in fact the purpose of the site—than defeating somebody in an argument.
As for the other user getting flagged, I appreciate your looking out for them—but it isn't about either you or them, it's about the general audience, which comes here hoping to read things that are more interesting than putdowns and tit-for-tats. We have rules (https://news.ycombinator.com/newsguidelines.html) that try to encourage that and discourage the opposite, and when people break those rules, it's good to mark that by flagging the comments because it indicates to the rest of the userbase that concern for discussion quality remains present here.
* https://hn.algolia.com/?dateRange=all&page=0&prefix=true&sor...