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This is a fair point. For folks who want a “just works” Unix system, disabling SIP probably makes sense. But most it’s still very niche.

Is there a way to make a separate partition of MacOS and have one copy with SIP and one without?

> But most it’s still very niche.

I'd say that the whole containerization topic is niche

> Is there a way to make a separate partition of MacOS and have one copy with SIP and one without?

I think you can install macOS VM on your macOS host and disable SIP _inside VM_.