My guess though is it's probably a plot device where the storyteller takes a known phenomenon and just exaggerates it to magical-mythical proportions, which may contribute to the story being repeated as it strikes the balance between the relatability of the real phenomenon and the attention-grabbing otherworldliness of its exaggerated version.
For that reason, I think an event completely different from the yearly flooding is more likely, for example the Minoan eruption or Black Sea deluge hypothesis.
But the one that is most intriguing IMHO is the mediterranean sea event that happened but it is 6M years ago. Could ancestors of genus Homo have passed that story long for all that time even across speciation???
https://www.uu.nl/en/news/first-direct-proof-of-mega-flood-i...