In both cases, defining the actual thing under discussion is hard. If you can accurately predict a decision in advance, is that "free will"? If an organism reacts to a stimulus in an appropriate manner, is that "intelligence"?
In both cases, we're complex chemical organisms doing all of this with complex chemistry. If we rule out souls and spirits and similar, then it's just chemistry.
If we're following a predefined set of chemical rules in response to a set of stimuli, then how is that "free willed" or "intelligent"? The arbitrary line between tropism and intelligence seems very arbitrary.
But on the other had, we are made of meat. We experience free will and intelligence. We think, and make decisions, seemingly unrestricted by the method we use to do that. We are clearly intelligent, and clearly make decisions that we are apparently free to make.