That's one of the reasons that multicollinearity is seen as a big deal by statisticians, but ML practitioners couldn't give a hoot.
That's one of the reasons that multicollinearity is seen as a big deal by statisticians, but ML practitioners couldn't give a hoot.
The point about PCA applies to population genetics and psychometrics (IQ). Some conclusions have been derived using PCA that appear to be supported by little else, and these have come under question.
Statistical modeling is done primarily in service of scientific discovery--for the purpose of making an inference (population estimate from a sample) or a comparison to test a hypothesis derived from a theoretical causal model of a real-world process before viewing data. The parameters of a model are interpreted because they represent an estimate of a treatment effect of some intervention.
Methods like PCA can be part of that modeling process either way, but analyzing and fitting models to data to mine it for patterns without an a priori hypothesis is not science.
But theoretically speaking, in a scientific context, why would you want to fit an explanatory model that includes multiple highly (but not perfectly) correlated independent variables?
It shouldn't be an accident. Usually it's because you've intentionally taken multiple proxy measurements of the same theoretical latent variable and you want to reduce measurement error. So that becomes a part of your measurement and modeling strategy.