Cause it's not an ecosystem, right? It's just a resource for us to drain.
Edit: In this specific case, the best case scenario is saving half the energy expenditure. Larger and more intrusive infrastructure with unknown effects for saving less than half the energy. Let's hope they always use renewables, btw.
(The main problem with desalination is not so much that you're taking the water as that you're then dumping concentrated brine into the ecosystem.)