I think this is super interesting, but i think you and the OP is talking about two different problems: presenting text to end users and structuring text for agents
The real change is in generation side, and now the spec docs are LLM generated JSON based on other spec docs or human prompts. LLMs seem to write JSON better than Markdown or YAML, if you tell it to follow a schema.
Wondering if you are referring to adherence to required data in a schema when you say LLMs do better with json vs markdown, or something else? Or perhaps to tool calls and/or strict json output being more reliably formatted for clean extraction?