I have talked with the team, and we seem to all understand that this is not going the way we want. I have made it clear that I will be looking for others to join in a "co-founder" capacity if I get the opportunity to go to YC this winter. They are reasonable people and good friends, so I don't think it will be a big problem to do a little equity restructuring if its in the best interest of the startup.
My real question is not "am I screwed?" because I already know that. I'm asking "how can I fix this now?" or, in other words "please help me find a new co-founder and a chance to get into YC (or another good startuppy environment)."