I'll outline a few obvious issues I see:
- No explicit protection against directory traversal attacks (../../etc/passwd type stuff) on upload and download.
- Shell command injection on the file name on upload.
- Naive authentication. - Unsalted, fast hash sent in the URL. - Password stored in clear text server side.
- No transport security (HTTPS).
This is cool as a interesting project to work on, but it should be made clear not to use this for anything just yet.