Given that it's supposedly also installing a trojaned version of SSH(d?), it's probably not an Apache exploit at all. It's some other sort of method which gives it root access - either an exploit or just guessing root passwords. :)
The details on that page are weak and there are all sorts of problems with the content in general (namely asking users to run a script blindly), but it seems to mimic what is described.
If security did not have a human element, these problems would have been solved long ago.