In an age of asymmetric public-key cryptography there would be very little to gain from number stations and a lot to lose.
I would have thought that recent OpenSSL, SecureTransport and GnuTLS news would disprove your point. Not only that, we don't know what bad actors with unlimited resources can do with our communications if tapped.
So number stations and OTP are still viable and always will be.
With respect to numbers stations the transmission is centralised as well which means it's hard to break the channel infrastructure without crossing a border physically.