"Han" in "Hanguk" is not the same "han" in "Han Chinese". Within East Asia, Koreans and Han Chinese are distinct ethnicities.
I'd expect there to be some small degree of genetic distinctness, but there has always been a history of interbreeding. There's even an old Korean stereotype about rich bewhiskered Chinese merchants who come down to marry a hot young Korean wife.
In short -- Ethnic differences between Han Chinese and Koreans: mainly cultural.