New Living Translation is the best reading bible. It just is well written in sentence structure and word choices.
New Revised Standard is the best "study" translation. To me it has the best "word for word" though I must say my old Hebrew teacher HATES this version's Old Testament version's word choices. (For example NIV translate the Greek word SOMA (flesh) sinful nature, I have an issue with that. In the Old Testament there are similar things that are merely differences in opinion)
As a Linux and Open Source (Free Software) person I hate these copyrights so there are a few open license projects that I haven' dug into yet.
That said, I agree with your Hebrew teacher that it's not my top scholarly choice for the Hebrew bible. For that, I prefer the New Jewish Publication Society translation. Just as the NRSV, it's very easy to find with full scholarly commentary and without best-guess emendations (i.e., if the Hebrew makes no sense, or the meaning of a word has been forgotten, they will clearly mark it, rather than reaching to the Septuagint/Vulgate/Targum for a translation), but in my personal opinion, the NJPS translation is a bit more accurate.
The people behind SAB simply went through the bible and picked out things to make fun of, completely devoid of any context, background, or doctrine.
If you are a skeptic, "bible apologetics" is what you should be googling. Not SAB, you will not learn anything from that.
The author of SAB fell into the snarky dismissal trap in more than a few places. It cheapens the work greatly.
The bible says day and night were created several days before the Sun (and each day has an morning, daylight, evening, and night period). Educated humans now know this is because of the Earth's rotation where the side of the Earth facing the sun is in daylight. The SAB I listed points out this flaw. The link you listed states "Obviously there were photons before there were stars" as it's rebuttal. I'm sorry but it's hard for me to even proceed any further. It's almost laughable.
So am I, as a logical person, supposed to believe that god is shooting various amounts of photons from his/her fingers creating these beautiful periods of morning, day, evening, and night for three days or so for no apparent reason? God hasn't created humans yet. God hasn't created plants yet. It serves no function. It's not like he's doing testing before it goes into production - the production environment uses a star (our Sun) and the Earth's rotation to create periods of day and night.
Finally, a few verses later the bible says "And God made two great lights; the greater light to rule the day, and the lesser light to rule the night: he made the stars also." The SAB rightfully points out that the moon does not emit light - it only reflects the Sun's light. The link you provided offers the following rebuttal: "obviously the author of the SAB hasn't spend much time outside at night at full moon. That's a lot of light". Hehe..
I do find the link you provided amusing but also a bit depressing honestly. People want so much to believe that they're willing to accept a rebuttal like the one you provided without even thinking for themselves.
If you're a hard empiricist, you will find nothing in the bible of interest to your life, save for historic/anthropological curiosity. There's no point in getting into such a discussion on Hacker News, interesting as that might be.
But the specific thing you mentioned - as an omnipotent being, the very idea of our existence "has no point", let alone the order elementary building blocks of the universe came into existence (at least as described by bronze-age scribes).
Be very careful with the "this has no reason to be this way" argument, it could very well be that you don't know the reason, or that there really isn't one.
A better "first time" reading plan would be to start in the book of John and through that and Acts, and Romans (they are all back to back). John shows Christ as God.
Acts shows the founding of the church and the early works, including an interesting argument in Acts 15 about some thinking that in order to become "Christian", one must first convert to Judaism.
And Romans gives a better understand of the position of the Jew, the moralist, and the Gentile before God. (and the book of Hebrews expounds on this more too)
But back to your question. There are many views to the first couple of books in Genesis. Here is my take:
In verse 3: "And God said, Let there be light: and there was light."
Ok, "light" is created. Everything good there.
4 And God saw the light, that it was good: and God divided the light from the darkness.
Yep, no light means, well no light.
5 And God called the light Day, and the darkness he called Night. And the evening and the morning were the first day.
So "Day" and "Night" spelled with a proper capitalization. And we have the phrase "evening and the morning" mentioned with no context as to how long the "evening and the morning" are or how long a "Day" is.
14 And God said, Let there be lights in the firmament of the heaven to divide the day from the night; and let them be for signs, and for seasons, and for days, and years: 15 And let them be for lights in the firmament of the heaven to give light upon the earth: and it was so.
Next up we clearly see the timing and "setting" of the mathematics behind our solar system, using the elements mentioned above "Day", and "Night", and even expounding into months and years.
16 And God made two great lights; the greater light to rule the day, and the lesser light to rule the night: he made the stars also. 17 And God set them in the firmament of the heaven to give light upon the earth,
This is not a separate event from the last verse, this is the solution to how our days and years are timed. Instead of "And God made two great lights", think of "And so God made two great lights".
This is how I've always taken this chapter. Perhaps it is terrible, or perhaps not. But clearly, the days and evenings mentioned in the earlier verses are not in the same context or definition as we (people that live on Earth) would normally think of them as. This is also where "gap theory" comes in, but I personally reject that as well.
Just because you don't know what the reason is, doesn't mean that there isn't one.
"God hasn't created humans yet. God hasn't created plants yet. It serves no function."
Again, just because you see no function, doesn't mean there isn't one. But there are logical explanations that scholars have suggested which do make sense.
One thing you might take into consideration is that the Bible says that in Heaven there is no sun and moon, but that it is illuminated by God Himself. There is no reason that in the midst of His creating the Earth, the same could not be true. Some scholars have proposed that the reason God set the pattern of the days and nights before creating the sun and moon was because He knew some men would tend to worship the sun and moon themselves, and He wanted to make it clear that it is He who sustains the Earth, not the sun and moon. I don't know if that was the reason, though it seems quite logical to me. I am content to believe God had a good reason, and He doesn't have to tell me what it was.
I think one of the biggest mistakes people make when reading the Bible, is that if something isn't explainable by natural phenomenon, they discount it entirely. But that doesn't make any sense. If you do not believe in the supernatural, then God doesn't make any sense. The whole point is that the creation is something He created, and that all of the "natural" norms we see from day to day are something that He put in place, and that He sometimes suspends for His own purposes (for instance, when Moses parted the Red Sea, or when God made the sun and moon stand still for Joshua). Even in that last example, I can hear people protesting about all the side-effects that would happen if "the sun and moon stood still". But again, the point is that everything is under God's control, and all of the interactions of matter in our universe operate as He has decided they will -- and He's under no obligation to make them always work one way. He can make it work however He wants, and that includes suspending the normal interaction of matter (normal side-effects and all) for however long and for whatever purpose He decides.
BTW, I'm not saying you are necessarily discounting anything because it requires the existence of the supernatural. I merely bring it up because I think it is relevant to the discussion.
(edited for formatting -- I keep forgetting to not indent the first lines of paragraphs :-D )