You misunderstood. The Uber software had sole control of the brakes (plus the human of course). The Volvo factory system was disabled so that it didn’t have negative interaction with the Uber system.
Your mistake is understandable. The article was poorly written, perhaps due to a rush to publish, as is the norm these days. Even if the NTSB report was unclear, that doesn’t excuse clumsy reporting.
If you’ve ever done significant mileage in a car with an emergency braking system you probably have experienced seemingly random braking events. The systems favor false positives over false negatives.