Regardless, I think it would be particularly illuminating if there <i>were</i> false positives. Why not have employees who are concerned wear dosimeters constantly, and at the same time stick reference dosimeters near where they usually stand while a scanner is in operation. If their dose is roughly the same as that of the reference dosimetry, there's not much room to complain about the scanners.
The fact is we are being constantly bombarded by low-level radiation from cosmic rays and radon gas simply by virtue of standing on the surface of the earth. The level of radiation these scanners output is much smaller than that. Wikipedia[2] cites an article in the European Journal of Radiology that gives a dose range for backscatter machines of between 0.07 and 6 micro-Sieverts. For reference, the National Council on Radiation Protection and Measurements reports that the annual radiation dose from naturally occurring radiation is on the order of several hundred micro-Sieverts [3].
TSA employees have a right to be concerned, because they are involuntarily being exposed to it as a course of their job, without this being made clear to them when they were hired. If you're a traveler, you should be much more concerned about the radiation dose you receive on the plane than the one you receive from the scanner.
[1] Health Physics Society page on radiation exposure on commercial airflights: http://hps.org/publicinformation/ate/faqs/commercialflights..... [2] https://secure.wikimedia.org/wikipedia/en/wiki/Backscatter_X... [3] http://hps.org/documents/environmental_radiation_fact_sheet....