But "TFA", although it derives from "RTFA", never seem to had the same negative connotations. It's just that sometimes you want to refer to the original article in question, but "original article" is long to type and/or ambigious. (Do you mean the news article from the NYT, or the scientific paper the NYT article is reporting on?) And "TA" is too short for people to clearly know what you're talking about (And did you mean "teaching assistant"?) "TFA" is short and unambigious: it always means the article linked to from the main page.
Long story short: Although etymology would suggest that "TFA mentions this" is as aggressive as "Maybe you should RTFA", in actual developed usage, they're very much not the same.
That was my understanding and my intended usage.
I wasnt aware "TFA" could be interpreted with a negative connotation, although that seems obvious in retrospect. Just trying to participate in the HN community, and also because its less typing : )
As a matter of writing style, repeating acronyms are invisible to the reader, whereas repeating words are annoying and remove value. This may be an opinion I gained from my military service, which was acronym-heavy.
I appreciate the question and its perspective.