that's not how safety margin work, is not a budget leftover set aside for known unknowns, it's there for unknown unknowns.
e: downvoters might want to read Feynman again
"If a bridge is designed to withstand a certain load … it may be designed for the materials used to actually stand up under three times the load … But if the expected load comes on to the new bridge and a crack appears in a beam, this is a failure of the design. The O-rings of the solid rocket boosters were not designed to erode. Erosion was a clue that something was wrong. Erosion was not something from which safety could be inferred"
if you fail a test before your margin you haven't established that your safe up to 90% margin, you've established that the hypothetical on which your design was based are wrong and no further inference might be warranted, regardless of whether you fail at 99% or 60% of where you expected to fail