> Presumably, with power and fresh water, the flight deck could be converted into a rather sizable garden. It even has access to sunlight and protection from pests.
You'd need dirt too, and lots of it.
In such a scenario, it'd probably most practical just to anchor or dock the ship somewhere safe near land, and use its facilities to jump-start a settlement. I'm guessing with the maintenance possible in such a scenario, all the ship's systems would break down within a decade or so (and it'd need to be refueled with enriched uranium at about that point, too), so you really wouldn't want to stay dependent on it for too long.
You could do hydro/aeroponics. You have plenty of fertalizer in the form of human waste, fish waste, and other things.