Only 0.005% ends up actually in the alfalfa to be exported to wherever the exported alfalfa goes.
Similar for almonds. I don't know the exact amount, but an upper limit is 0.03% of the water exported with the almond, and 99.97% left behind in the local atmosphere or local ground. That upper limit comes from counting the entire mass of the almond as water.
There are legitimate grounds to criticize growing high water usage crops in regions that do not have enough water naturally, but exporting water is not one of them.
I mean, once used this water ain't getting back to the aquifer anytime soon! If it were, we wouldn't be talking about aquifer depletion and there wouldn't be any concern regarding its use.