The naïve hypothesis would be to expect that de novo mutations, being random, should arise in differing populations -- even in different environments -- at the same rate; apparently this isn't the case.
The article doesn't explain the underlying mechanism, so I assume this is just premilitary observational science? The authors say this challenges neo-Darwinism, how?
One explanation is that environmentally selected genes (meta genes?) that promote mutation of de novo genes in regions of the genome under environmental pressure. These meta genes dispersed in a population would prime that population for the synthesis of new adaptations.