Think about how much benefit we gained during that time. And even then, anyone running in a trusted environment would rather have the optimization consequences be damned. Do you think HFTs patched their boxes to criple their perfomance? No.
Sure, now we know it's a problem we'll offer solutions for people who really need it. But it'll be a long while before the average person needs to think about this and in the meantime billions of people benefitted from better CPUs.