Is the $1000/ton a law a physics, or could that ever possibly scale up and come down an order of magnitude?
It's quite possible that SpaceX has access to some cheaper methane source. Texas produces a lot of it.
And SpaceX has speculated about eventually switching to some renewable source by e.g. synthesizing methane. In which case that would boil down to cost of electricity and carbon. I don't see that becoming cheaper short term but that could happen long term.