But then the statements about the discontinuous "vibrations". E.g. in the case of the 1 Hz cycle over half the window the author states that:
> Yet the FFT of this data is also very complex. Again, there are many harmonics with energy. They indicate that the signal contains vibrations at 0.5Hz, 1.0Hz, 1.5Hz, etc. But the time signal clearly shows that the 'vibration' was only at 1Hz, and only for the first second.
The implication that there is a vibration only at 1Hz is plain wrong. To have a vibration abruptly stop, you need many frequencies (in general the shorter a feature in the time domain the more frequency components you need in the frequency domain). If we compare for example a sine wave with a square wave at the same frequency, the square wave will have many more frequency components in the Fourier domain (it's a sinc envelope of delta functions spaced at the frequency of the wave in fact). That's essentially what is done in the example the sine wave is multiplied by a square wave with half the frequency (similar things apply to the other examples). Saying only the fundamental frequency matters is just wrong.
This is also not just a "feature of the fitting to sines", it's fundamental and has real world implications. The reason why we e.g. see ringing on an oscilloscope trace of a square wave input is because the underlying analog system has a finite bandwidth, so we "cut-off"/attenuate higher frequency components, so the square wave does not have enough of those higher frequencies (which are irrelevant according to the author) to represent the full square wave.