It's common for people that do endurance sports to actually eat pretty low quality food in order to consume enough carbs. When I'm on bike trips I will pretty much eat just about anything including candy and things like maltodextrin in water just to keep myself going when I normally wouldn't eat these things. It's definitely not good for your gut. But overall is it better than being sedentary? Yes definitely
I personally believe that exercise is overwhelmingly beneficial and exercise every day, but there is evidence that athletes have slightly increased risk of ALS (though this may be related to something other than exercise itself, eg maybe the fields on which sports teams play have harmful chemicals, higher head injury rates, etc)
Exercise creates a lot of oxidative stress, and after a while or too much exercise your body can’t handle the oxidative stress and that’s where things start going wrong.
I've been heavy for a long time despite doing a lot of exercise and the one thing that worked for losing weight before Zepbound was that time I (1) had something like a manic episode and during that (2) discovered the weird pain that had been moving between my upper back, shoulders and neck for decades was really caused by trouble with my TMJ and had six months where I just threw random foods (let's say pork loin, seaweed, carrots and turnip, it was a running gag to put together the strangest combinations I could) into a pot and blend them with an immersion blender before cooking... and it cleared up.
My nutritionist now who is supervising my weight loss is pretty happy that I'm an exerciser but I haven't been doing quite as I'd like lately because I hurt my leg practicing theranthropy [2] and have had to pace myself, like developing isolated kettlebell exercises I can do at home that work my upper body without loading my quads though I am getting better and probably could start doing more whole-body stuff.
[1] ... which I don't quite believe, once I got into biofeedback I learned how to read two-lead EKGs and I can't really make out the P-wave a lot of the time and I don't think 10 bad heartbeats out of 10^6 evaled by a computer means anything
[2] ... if you gotta know I "go out-as-a-fox" to charm people to do street photography and part of that is "walking like an animal" while carrying a heavy loadout of equipment and learning to do that without putting too much stress on my body, it didn't help at all that I tried a pair of New Balance 1080's which were the worst shoes I've ever tried, like they caused more trouble than the high-heel boots I've worn going out in drag for halloween.
https://my.clevelandclinic.org/health/diseases/23920-athlete...
like there's no doubt that exercise overall is good for you but if you're the kind of person who regularly runs marathons and does the training you are at higher risk of A-Fib and you may have all kinds of abnormal findings with the stethoscope, echocardiograms and such and... you might go to one cardiologist and they will be all freaked out and another one will think it's a nothingburger. I've been told I shouldn't do more than an hour of cardio a day: like back in my time in the wilderness when I was trying to invent ChatGPT 10 years too early and doing a gangbusters job filling the top of a sales funnel but never making sales, doing twice that helped me keep calm and sustain the effort.