The automated audit only covers static analysis. When the agent actually runs, hitting MCP servers, making HTTP calls, getting responses back, that's where the real problems show up. Prompt injection through tool responses, malicious libraries that exfiltrate env vars, SSRF from agents that blindly follow redirects. Code audits miss all of it because this is a runtime and network problem, not a code quality problem.
Built Pipelock for this actually. It's a network proxy that sits between the agent and everything it talks to. Still early but the gap is real. https://github.com/luckyPipewrench/pipelock